FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17076805
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA154250.011.3412839
AGAGCAC164600.010.3219868
GATCGGA193250.09.1221771
TCGGAAG220850.08.0189743
ATCGGAA256350.07.19363642
AAGAGCA285000.06.61816367
AGTCACA59150.06.207247725-29
GAAGAGC329750.05.8728466
GGAAGAG324500.05.56852445
CGGAAGA361100.05.2632934
CAGTCAC74300.05.077221425-29
Produced by FastQC (version 0.11.5)