Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005184821 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17076805 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 19650 | 0.0 | 8.942996 | 1 |
TCGGAAG | 22165 | 0.0 | 8.282086 | 3 |
AGAGCGT | 21910 | 0.0 | 7.855806 | 8 |
ATCGGAA | 24690 | 0.0 | 7.173581 | 2 |
GAGCGTC | 24890 | 0.0 | 6.9151335 | 9 |
AAGAGCG | 26500 | 0.0 | 6.8212357 | 7 |
GAAGAGC | 33370 | 0.0 | 5.5679603 | 6 |
TAGCCTA | 3850 | 1.4679244E-9 | 5.5384088 | 1 |
TAGATCT | 6255 | 0.0 | 5.4551945 | 40-44 |
GGAAGAG | 33635 | 0.0 | 5.3095136 | 5 |
CGGAAGA | 35800 | 0.0 | 5.290141 | 4 |
TGTGTAG | 6890 | 0.0 | 5.0151186 | 40-44 |