FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11355511
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG3200.007537466513.5051343
CCACTCA35150.011.8804259
GCCACTC55000.07.72357948
AGCCACT65700.06.35611777
AAGCCAC71200.05.9662486
ACGTTAA25757.223516E-75.87182764
GTGAGTA23151.6455882E-45.29113252
GTTACGT42258.1854523E-105.2867121
AGTGAGT21550.0019519465.01527451
Produced by FastQC (version 0.11.5)