FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13526991
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA33050.022.4328987
ACACACT52050.013.9669826
ACACTAT57700.013.0988488
CACTATA60650.012.34303959
AACACAC65800.011.2671295
CTAGCTA14000.010.7998225-29
CAACACA82150.09.200494
ATCTAGC15500.09.01146225-29
TCTAGCT19100.07.76531625-29
ACAACAC98150.07.6273253
AGTCCTA35050.07.51071171
TATCTAG20400.07.05870625-29
CGTTAAA64150.06.84439565
ATACAAC126350.06.42413041
GTCCTAA34955.456968E-126.38552672
CCGTTAA65300.06.1731114
GTTAAAT79850.05.31837566
CCCCTAA31250.05.2529626110-114
TACAACA154050.05.1405932
Produced by FastQC (version 0.11.5)