FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005184981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005184981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14790867
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT101100.035.4712072
CCAGTCG132800.026.8776991
AGTCGTA80300.021.6992473
AGTCGTG57250.020.8774533
GTCGTAT111900.09.0723384
AGTCGTC81600.08.7355433
GTCGTGT81400.08.3144534
ACCACTA49350.07.586748
CACCACT74050.05.63942247
CCACTAC69450.05.5983379
CTAGACC14250.05.3556848120-124
GTCGTCT87450.05.26926854
CCTAGAC13200.05.127173120-124
Produced by FastQC (version 0.11.5)