FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14868961
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG50350.06.063171140-144
TTAGATC19150.05.865287140-144
GATCGGA167750.05.725676140-144
ACACGTC99350.05.406353140-144
AGATCGG197000.05.2702656140-144
CTAGATC17100.05.136853140-144
CACGTCT105250.05.1169705140-144
CACACGT111900.05.057384140-144
Produced by FastQC (version 0.11.5)