FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14635256
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT74250.019.812034
AGTGGTA76000.019.135365
AGCAGTG108250.014.3886862
GTGGTAT110600.013.3443566
GCAGTGG127450.012.164493
GTATCAA135100.011.2974229
AAGCAGT144900.011.2469641
TGGTATC135050.011.08836657
GGTATCA140800.010.635548
Produced by FastQC (version 0.11.5)