FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11770998
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA115300.010.4268479
GATCGGA132250.09.1709741
AGAGCAC128250.09.0933438
TCGGAAG147950.08.418773
ATCGGAA167550.07.3480012
GTATTAG31405.820766E-116.5547421
AAGAGCA191650.06.49835067
GTATAGA62000.05.80940441
GGAAGAG234100.05.7505065
CGGAAGA233000.05.56199264
GTATTCA116500.05.3000571
GAAGAGC241950.05.20688876
Produced by FastQC (version 0.11.5)