FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13266238
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT95200.014.9740074
AGTGGTA118100.012.0698125
AGCAGTG121950.011.9856072
GCAGTGG131100.010.9834073
GTGGTAT157050.09.4441666
TGGTATC163850.08.8764497
AAGCAGT172050.08.2311
GTATCAA195700.07.76293479
GGTATCA188150.07.65349968
Produced by FastQC (version 0.11.5)