FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17039971
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA82300.06.56121549
ACCACTC92300.06.24036368
CCCTTAA65200.05.8516874
GGCCTAA19700.05.84743975-79
AACCACT102850.05.60024837
Produced by FastQC (version 0.11.5)