FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17039971
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA82400.06.99009479
GGCCTAA21800.06.141746575-79
CCCTTAA69100.05.83442974
ACCACTC97200.05.77770048
AACCACT108200.05.1899537
Produced by FastQC (version 0.11.5)