Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005185237 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14258439 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CAGTCGT | 11190 | 0.0 | 40.671486 | 2 |
CCAGTCG | 15585 | 0.0 | 29.623394 | 1 |
AGTCGTA | 8135 | 0.0 | 28.235472 | 3 |
AGTCGTG | 6530 | 0.0 | 21.391956 | 3 |
GTCGTAT | 9245 | 0.0 | 14.019093 | 4 |
AGTCGTC | 8425 | 0.0 | 11.965202 | 3 |
AGTGAGT | 3350 | 0.0 | 8.411251 | 1 |
GTCGTGT | 9005 | 0.0 | 8.315798 | 4 |
GTGAGTA | 3670 | 0.0 | 7.6524696 | 2 |
GTCGTCT | 8560 | 0.0 | 7.065775 | 4 |
GATCGGA | 11970 | 0.0 | 6.69992 | 1 |
TAACCCC | 4490 | 0.0 | 6.4144406 | 9 |
TCGTATT | 12970 | 0.0 | 5.606987 | 5 |
TCGGAAG | 15095 | 0.0 | 5.390229 | 3 |
TCGTGTT | 9375 | 0.0 | 5.2225885 | 5 |
AGAGCGT | 15910 | 0.0 | 5.113968 | 8 |