FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16969851
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAAAC158700.08.3419551
GGTAAAT176000.07.52197841
GGTAAAA274650.07.36272531
TACGCTA34250.06.9386836
GGTAACT79900.06.91894961
GGTCTAA22203.631976E-86.8808121
CCTATAC86200.06.4976581
GGTATAA155750.06.3049131
GGTAAAG225250.06.29713771
TAGCCCT59800.06.26417832
GGTAGTT75150.06.19475841
GGTAAGT76450.06.18456651
GGTATAG120350.06.164921
GGTACAC78450.06.1196191
AACACTA55750.06.07105067
CACTATA58150.06.0682179
GGTATTA123700.06.0567681
CCTAAAT60900.05.9720871
GGTAGAC75450.05.88090231
CCTAAAA110250.05.8719831
Produced by FastQC (version 0.11.5)