FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18275307
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAG28000.010.0282788
CCCTAAG26600.09.4734086
CCTAAGA33350.08.2036597
TACCCTA39950.07.3913674
ACCCTAA38550.06.72353945
TAAGAGC61500.05.50227839
Produced by FastQC (version 0.11.5)