FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15219254
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA37200.022.71923420-24
CCTAGCT37600.022.36266120-24
CTAACTA47150.018.14116325-29
CCTAAGG52150.016.2888140-44
GCTAACT53550.015.89236125-29
GGTCCTA54150.015.60732335-39
AGCTAAC55600.015.45959220-24
CCCTAGC15900.015.30340520-24
ACCTAGC15100.015.16068120-24
GTCCTAA59450.014.3612335-39
CTAAGGT59800.014.10873540-44
TAGCTAA62700.014.07639520-24
TCCTAAG61350.013.93993335-39
TCCTAGC18250.012.54390420-24
GCCTAGC15600.010.79840920-24
TAGCGAA83250.010.49782345-49
CCCCTAG8500.09.65516915-19
CCAGTGA91750.09.63549350-54
GTAGCGA91900.09.61939245-49
TAACTAT100850.09.00977425-29
Produced by FastQC (version 0.11.5)