FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16617695
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCAAC103850.09.0808943
CTAGAGG26000.07.477117550-54
TCTAGAG27050.07.13364250-54
CCAACAT140850.06.951045
GTATCCA142650.06.91006661
TCCAACA144100.06.8941834
TATCCAA143350.06.62971642
AATCTAG30900.06.57159445-49
ATCTAGA35650.06.05957145-49
AACATCC181400.05.833757
ACATCCA180650.05.69856938
TAATTGC96550.05.51756145
CATCCAC219900.05.27074869
Produced by FastQC (version 0.11.5)