FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15436539
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAATG20050.09.37631
ACTAATC21750.09.2674069
CTAATGA26253.4578989E-96.5909082
AACTAAT36051.2732926E-116.19035968
CAACTAA28851.680819E-75.73906857
Produced by FastQC (version 0.11.5)