FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17825436
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA346000.06.01294339
AGAGCAC358150.05.8090888
CTAGATC29100.05.4938855140-144
CACACGT232400.05.348405140-144
GATCGGA407750.05.1254331
TCGGAAG435850.05.0199943
Produced by FastQC (version 0.11.5)