FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12659289
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA32500.07.0857389
GATCGGA178650.06.96465871
AGAGCGT197800.06.29441648
TCGGAAG205900.06.22360043
ATCGGAA228600.05.9229512
AAGAGCG230450.05.80924847
TAGATCT49150.05.272799540-44
GAGCGTC247700.05.2005059
GGAAGAG248850.05.11948355
Produced by FastQC (version 0.11.5)