FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15990810
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA59850.012.5370599
GCCACTC72900.010.4907088
CCGTTAA65550.08.6924744
AGCCACT96450.08.3032347
AAGCCAC112200.07.5877966
CGTTAAA81250.07.36960945
GGCCTAA30650.05.91838775-79
GTTAAAT100900.05.57737646
TCCGTTA110450.05.4781863
ACAAAGC166200.05.11415863
Produced by FastQC (version 0.11.5)