FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16110675
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAG26650.09.1851326
CTAAGAG27900.08.7736118
TACCCTA38500.07.10602144
ACCCTAA40000.06.479575
CGACTTA41600.06.40342146
CTTACAC52350.05.63850649
CCTAAGA46651.8189894E-125.55590157
GTACCCT59600.05.31696463
Produced by FastQC (version 0.11.5)