FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185411

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185411
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14231659
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT100900.041.8944322
CCAGTCG133650.032.0597421
AGTCGTA67050.030.9279543
AGTCGTG57400.024.8376663
CCACTCA50700.015.4796369
GCCACTC58750.013.9716718
GTCGTAT90250.013.9616294
AGTCGTC79850.010.6405613
GTCGTGT81300.010.4504914
AGCCACT86000.09.7119137
AAGCCAC101850.08.0591756
GGCCTAA25200.06.68530975-79
TACAAAG134150.06.6564152
GTCGTCT86600.06.0694634
CTCACTA29700.05.62481915-19
ATACAAA169750.05.32077031
ACAAAGC163400.05.28794153
CATTAGG33700.05.1701913100-104
Produced by FastQC (version 0.11.5)