FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13894323
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT110200.027.5182152
CCAGTCG181450.016.9772131
AGTCGTA92250.016.0821463
AGTCGTG65750.015.1156393
AGTCGTC96750.07.51819473
GTCGTAT113050.06.8801254
GTCGTGT104150.06.2233814
Produced by FastQC (version 0.11.5)