FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14000728
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA22100.014.3261767
ACACACT41850.08.2533966
AACACAC52200.07.3062135
ACACTAT50550.07.11735638
CACTATA52900.07.07322659
CTAGCTA12350.06.060345625-29
ATCTAGC12750.05.644438725-29
CAACACA71550.05.2297284
Produced by FastQC (version 0.11.5)