FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185519

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185519
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16143943
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA172850.08.6840271
AGAGCGT209300.07.3352928
TCGGAAG215900.07.26907253
GAGCGTC212100.07.2044739
AAGAGCG238850.06.69975667
ATCGGAA251950.06.60735852
GAAGAGC285350.05.48167326
GGAAGAG315150.05.1459335
TAGCGTG58800.05.06768235-39
TAGCGTA60150.05.05043230-34
Produced by FastQC (version 0.11.5)