FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15575132
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTATT70000.010.9015716
CTCCCTA60050.010.7928894
CTTAGTC48100.010.6266068
TTAGTCC49850.09.9647249
CCTTAGT59300.09.2265687
TCCCTAT88250.08.4840675
GCTCCCT82550.08.1164843
TGCTCCC93350.07.177392
Produced by FastQC (version 0.11.5)