FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17510073
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTACGG155950.010.2921359
TAGTGTA35400.06.71132566
GTAGTGT39600.06.5448925
TGTCTCG57350.06.52816442
GTGTACG95450.05.95850948
CTCGTGT54600.05.93355565
AGTGTAC46301.0913936E-115.44218737
CTGTACG165750.05.2121178
CTGTCTC86700.05.17149161
CTCTGTA78100.05.1621976
TGTGTAG43702.0263542E-95.1074192
TGTAGTG56155.456968E-125.0004464
Produced by FastQC (version 0.11.5)