FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185608

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185608
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14240075
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCCCAA82700.010.7060089
TTAGGTA25450.08.31608520-24
GGTTCGG129050.07.9882871
GTTCGGA125050.07.4275192
CGAACCC98100.06.311055
TCGGAAG148850.06.1422444
AAGCCCA168550.05.89356768
TAAGGGG37600.05.782150725-29
TCCGAAC121450.05.690443
TTTAGGT37950.05.65280320-24
CTTCCGA125250.05.58508161
TAGGTAA38600.05.483014620-24
CCGAACC128250.05.16419464
AACCCGC122950.05.09401047
TTCGGAA196600.05.0898323
Produced by FastQC (version 0.11.5)