FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12946184
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA142150.06.8874329
AGAGCAC150650.06.35547268
GATCGGA177150.05.80913161
TCGGAAG186000.05.6899923
ATCGGAA214050.05.1125272
Produced by FastQC (version 0.11.5)