FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13654817
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTCGT248600.0101.9852
CCAGTCG272750.093.6625441
AGTCGTA145150.082.639863
AGTCGTG103150.078.107453
GTCGTAT135100.052.9201164
AGTCGTC110350.047.8259123
GTCGTGT104300.041.694574
GTCGTCT98750.031.42444
TCGTATT155050.021.1283155
TCGTGTT97650.020.6448175
TCGTATA83700.019.8706365
GTCGTGA97050.019.3629634
GTCGTAC89100.018.989654
GTCGTAA98900.017.1079674
TCGTGTG59850.015.3982385
GTCGTAG123850.014.1847174
TCGTATC106500.014.0617375
TCGTATG75400.013.9414125
GTCGTGG124800.011.6536944
TCGTGTC82550.011.6000485
Produced by FastQC (version 0.11.5)