FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14453074
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG30100.012.1987878
GTGAGTA36050.08.188912
AGTGAGT33950.08.0591891
TAACCCC35600.07.48280959
CCTTTAG51400.07.2837194
TTAGCAT55300.07.03042557
CTTTAGC74950.05.37934455
Produced by FastQC (version 0.11.5)