FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16462004
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTAG31350.017.9115985
CCCCTTA37400.016.3615574
CCTTAGA44100.013.2228096
TTAGAGC45850.012.2454818
CTTAGAG47750.012.0611477
TAGAGCC57000.010.8603599
TGCCCCT122950.05.1533952
GCCCCTT125700.05.03993233
Produced by FastQC (version 0.11.5)