FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16660061
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA38500.010.6587037
CACTATA38900.09.6233659
ACACTAT41350.09.57585058
AAACACT72150.05.68759546
ACCAAAC72750.05.5419113
TACCAAA89400.05.24365952
CCAAACA84050.05.2249364
ATACCAA102100.05.1396331
Produced by FastQC (version 0.11.5)