FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15341813
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAACCG23850.08.451498
TCTAACC29401.8189894E-127.10091547
AGTGAGT34603.6379788E-126.47281841
ATCTAAC35753.8926373E-105.83963356
GTGAGTA36657.203198E-105.6979412
TAACCCC45201.6916601E-105.2560959
Produced by FastQC (version 0.11.5)