FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18941583
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA200600.09.59668351
AGAGCAC202600.09.4156828
GAGCACA205200.09.1560829
TCGGAAG270950.07.33991153
ATCGGAA302900.06.5423212
AGTCACA75500.05.568945425-29
AAGAGCA379600.05.537357
GGAAGAG415500.05.24948845
CGGAAGA404250.05.1818924
GAAGAGC423900.05.06055556
Produced by FastQC (version 0.11.5)