FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17394886
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGTAG30700.08.9100126
GTAGCAT37650.07.647749
TAGTCAT47600.07.1076176
TATATAG62850.06.3045662
CTGTAGC48350.06.2529467
TAGTTAG11850.05.953060630-34
TGTAGCA59900.05.52806148
TATAGTC74050.05.35083684