FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12174437
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCTAG5500.08.11610390-94
GACCTAG5409.331416E-106.66650785-89
AGCTAGC8050.06.260668390-94
CTAGCTA5801.1181455E-65.46189390-94
Produced by FastQC (version 0.11.5)