FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14348592
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAACG23251.06296284E-76.5029861
CCTAATT54150.06.38203571
CCTCTTT197100.06.35593031
CCTAAGG21609.157558E-65.99977871
CCTCCAG123800.05.99008561
CCTAAAC44100.05.8773341
CCTCCTT175950.05.85144661
CCTATGA81250.05.8483991
CCTAATG45550.05.8483031
CCTGTTA62550.05.7551831
GGTAACG109300.05.6649331
GGTGTTA52150.05.66038561
CCTGAGA40202.237357E-105.55203441
CCTCTAT100200.05.532731
CCTATTT128400.05.49512431
CCTCTCG99000.05.45434431
CCTCTTA42601.8553692E-105.40825131
CCTACTC45654.0017767E-115.36234331
CCTAATA54100.05.3232791
CCTGTTG119250.05.31301161
Produced by FastQC (version 0.11.5)