FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14356596
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC127150.015.1158638
GAGCACA127250.014.821149
GATCGGA131350.014.4648731
GTCCCTT77150.013.1611013
GTGTCCC78300.012.6925391
TGTCCCT82000.012.470492
TCGGAAG181100.010.6965283
CTAGGAG11100.010.508019105-109
AAGAGCA197400.010.3199087
GGCTAGG11150.010.200849100-104
AGGCTAG12200.09.794952100-104
TCCCTTG116350.09.4038614
ATCGGAA220850.09.0321552
GAAGAGC232800.08.8434076
GCTAGGA14150.08.141274105-109
CCCTTGA140450.07.9953865
GGAAGAG273950.07.38365845
TTGACCA141550.07.27217348
CTTGACC154500.06.9421557
CGGAAGA307700.06.69063764
Produced by FastQC (version 0.11.5)