FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14356596
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA133000.013.8879461
GTGTCCC77450.012.1619861
AGAGCGT159000.012.0126188
GTCCCTT76650.011.645823
TGTCCCT78500.011.292252
GAGCGTC176650.011.0163849
TCGGAAG180250.010.6634213
AAGAGCG180750.010.5676337
CTAGGAG12550.09.980239105-109
ATCGGAA216550.09.4515962
AGGCTAG14600.08.973205100-104
GAAGAGC233600.08.7322016
GGCTAGG15500.08.637942100-104
GCTAGGA15300.08.3745985105-109
TCCCTTG117000.08.0014914
TAGATCT54150.07.524263440-44
GGAAGAG276900.07.39225
TTGACCA138400.07.2908968
CCCTTGA139300.07.19187365
GTATCCC104700.07.09054239
Produced by FastQC (version 0.11.5)