FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14725777
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA150050.08.90119651
AGAGCGT168950.08.0534978
GAGCGTC175700.07.4981539
AAGAGCG201650.07.14023737
TCGGAAG218200.06.2369253
TAGATCT46100.06.1840840-44
GAAGAGC239000.06.08463246
ATCGGAA252350.05.73541832
TAGCGTG52850.05.312515335-39
Produced by FastQC (version 0.11.5)