FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16949418
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTAA27000.011.203393
CGACTAA18401.0093572E-87.8284563
CTAGATC18250.05.52303140-144
CTATACT73950.05.29312661
TATACTA71400.05.24553252
GTTCCTA59001.8189894E-125.00514132
Produced by FastQC (version 0.11.5)