FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13389605
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTGCG68550.07.2456036
CCTGTAG59350.07.15589956
GTAGCAT65850.06.5588619
CTGTAGC75650.06.280127
ATCCAAC83650.05.8559473
ATTGCGC95750.05.71357257
TGTAGCA77000.05.42217358
CTAGAGG18600.05.41817750-54
TAGTCAT65350.05.3973856
Produced by FastQC (version 0.11.5)