FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13243340
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACTAA16107.859853E-98.4969093
CGTCTAA20751.5061232E-97.63374763
CACACTA20408.712959E-97.41177754
CTAACCC20303.3364267E-66.3841758
ACTAACC25609.9436875E-86.18744047
CACTAAC26708.464131E-65.3932066
Produced by FastQC (version 0.11.5)