FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11226315
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTG11500.020.034787
GCTAGCT7800.018.4615386
GGGCTAG9950.014.47236254
GTCTAGC6803.5017365E-813.7647065
GGCTAGC12450.012.1445795
TCTAGCT8658.011848E-710.8208096
GGTCTAG8809.996911E-710.6363644
TAGCTGG37950.07.2094868
GGGTCTA18708.644838E-76.9304813
Produced by FastQC (version 0.11.5)