FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185869

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185869
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17850841
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA316450.08.2579699
AGAGCAC327200.08.0307738
GATCGGA405150.06.6753281
TCGGAAG407050.06.59522153
AAGAGCA419500.06.538397
ATCGGAA462900.06.0171672
GGAAGAG471000.05.7761285
GAAGAGC483300.05.65935236
CGGAAGA535900.05.21094234
CTAGATC28500.05.154202140-144
CTCGTAT112850.05.00178440-44
Produced by FastQC (version 0.11.5)