FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11619981
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA11300.05.861819390-94
GATCGGA302300.05.7130384140-144
CTAGATC26550.05.6965365140-144
AGCTAGC11450.05.53350490-94
GACCTAG8451.4733814E-105.453159385-89
AGATCGG332850.05.4310184140-144
TCGTGTA206200.05.392805140-144
CCCCCTA19300.00271042795.2253151
GTAGGGA137600.05.1921754140-144
TAGATCG86900.05.171552140-144
CCTAAGG25109.967891E-55.1658351
GTCGTGT183200.05.149937140-144
TAGCTAG11850.05.10368690-94
TGTAGGG151000.05.084361140-144
GCTAGCG8505.329639E-95.08224290-94
Produced by FastQC (version 0.11.5)