FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16799634
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGTAG51000.010.445716
CTGTAGC73000.07.98796277
GTAGCAT65650.07.78565039
GAGCACA201050.07.6626859
AGAGCAC216350.07.2538888
TATAGTC86150.07.1030994
TGTAGCA77350.06.88728
TAGTCAT81550.06.8856846
GATCTAA17350.06.22450745-49
ATAGTCA101250.05.75925645
TATATAG106450.05.54835752
GATCGGA290350.05.45984131
GCCTGTA109750.05.31320955
CTAGATC17200.05.1900897140-144
Produced by FastQC (version 0.11.5)