FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15099286
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCTA31900.023.64990620-24
CCTAGCT33150.022.97528820-24
CTAACTA38800.019.66676725-29
GGTCCTA42200.018.32128135-39
GCTAACT42750.017.84960425-29
AGCTAAC43000.017.74582720-24
TAGCTAA43600.017.5346420-24
GTCCTAA45950.016.66940535-39
CCTAAGG46500.016.37987140-44
CTAAGGT48950.015.94242540-44
TCCTAAG50300.015.31368735-39
ACCTAGC14150.014.55018120-24
CCCTAGC13950.014.24274520-24
GCCTAGC14900.012.46499920-24
TCCTAGC15800.012.11946320-24
TAGCGAA73200.010.89731345-49
CCAGTGA74050.010.73362950-54
GTAGCGA73650.010.73298145-49
TAAGGTA75900.010.60419840-44
TAACTAT78600.010.18453125-29
Produced by FastQC (version 0.11.5)