FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005185967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005185967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15044100
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAC25650.012.9110936
TAGACCC26300.012.5919978
TTAGACC26500.012.225297
AGACCCC46050.07.9727319
GGGGGGG26352.5605914E-86.2950162
TAGTTAG59050.06.09596734
CACACGT83050.05.3569226140-144
TGGGGGG20458.330441E-45.34681651
GTCTCAG39854.281901E-95.30477571
Produced by FastQC (version 0.11.5)